Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTKAKQQSSQQMTRGFEPYQETKGEEYMSERMRAHFTAILNKWKQELMEEVDRTVHHMQDEAAN-FPDPADRASQEEEFSLELRARDRERKLIKKIDETLQLIEDEEYGWCDSCGVEIGIRRLEARPTATLCIDCKTLAEIREKQLGS
3A5Y Chain:B ((258-337))
-------------------------------------------------------VYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNL--IEALKVGMPDCSGVALGVDRL-----VMLALGAETLAEV-------
General information:
TITO was launched using:
RESULT:
Template:
3A5Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5815 for 403 contacts (14.4/contact) +
2D Compatibility (PS) -8601 + (NN) -3076 + (LL) 5568
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: -4444.0 ( -11.03 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_3A5Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A5Y-query.scw
PDB file :
Tito_Scwrl_3A5Y.pdb
: