Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPPITITRLDLQRLERLLDGLDEFGPAAEALEAELSRAQVVGHDEIP-PGVVTMNSTVRCREESSGKEYTLTLVYPEDVAG-EGKVSILAPVGTALLGLTIGQTIDWPAPSGKTLKLTLLEIEYQPEAAGDYAR
1GRJ Chain:A ((58-157))
-------------------------CEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVI-------VEFEVIKVEY----------
General information:
TITO was launched using:
RESULT:
Template:
1GRJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61822 for 580 contacts (-106.6/contact) +
2D Compatibility (PS) -9490 + (NN) -1802 + (LL) 1988
1D Compatibility (HY) -7600 + (ID) 1100
Total energy: -79826.0 ( -137.63 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_1GRJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GRJ-query.scw
PDB file :
Tito_Scwrl_1GRJ.pdb
: