Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
3N84 Chain:C ((4-112))
------------------------------------------------------MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQA------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3N84.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61765 for 719 contacts (-85.9/contact) +
2D Compatibility (PS) -11712 + (NN) -6273 + (LL) 5040
1D Compatibility (HY) -14800 + (ID) 5450
Total energy: -94960.0 ( -132.07 by residue)
QMean score : 0.272
(partial model without unconserved sides chains):
PDB file :
Tito_3N84.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N84-query.scw
PDB file :
Tito_Scwrl_3N84.pdb
: