Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFSGNWKIIRSENFEEMLKALGVNMMMRKIAVAAASKPAVEIKQENDTFYIKTSTTVRTTEINFKIGEEFEEQTVDGRPCKSLVKWESGNKMVCEQRLLKGEGPKTSWSRELTNDGELILTMTADDVVCTRVYVRE
3D97 Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVRTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTLELTNDGELIETMTADDVVCTKVYVRE
General information:
TITO was launched using:
RESULT:
Template:
3D97.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31475 for 940 contacts (-33.5/contact) +
2D Compatibility (PS) -15320 + (NN) -4861 + (LL) 208
1D Compatibility (HY) -17600 + (ID) 6250
Total energy: -75298.0 ( -80.10 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_3D97.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D97-query.scw
PDB file :
Tito_Scwrl_3D97.pdb
: