Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
4G0N Chain:A ((1-166))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEE--AMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4G0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103398 for 1353 contacts (-76.4/contact) +
2D Compatibility (PS) -18029 + (NN) -4910 + (LL) 552
1D Compatibility (HY) -22800 + (ID) 8200
Total energy: -156785.0 ( -115.88 by residue)
QMean score : 0.683
(partial model without unconserved sides chains):
PDB file :
Tito_4G0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G0N-query.scw
PDB file :
Tito_Scwrl_4G0N.pdb
: