Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVRPLNCIVAVSQNMGIGKNGDLPWPPLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKEPPRGAHFLAKSLDDALRLIEQPELASKVDMVWIVGGSSVYQEAMNQPGHLRLFVTRIMQEFESDTFFPEIDLGKYKLLPEYPGVLSEVQEEKGIKYKFEVYEKKD
4KD7 Chain:A ((1-186))-VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND


General information:
TITO was launched using:
RESULT:

Template: 4KD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118749 for 1398 contacts (-84.9/contact) +
2D Compatibility (PS) -20123 + (NN) -10388 + (LL) 208
1D Compatibility (HY) -26400 + (ID) 8350
Total energy: -183802.0 ( -131.47 by residue)
QMean score : 0.643

(partial model without unconserved sides chains):
PDB file : Tito_4KD7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KD7-query.scw
PDB file : Tito_Scwrl_4KD7.pdb: