Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMLLALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGGNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYD--KKQTWTVQNNGHSVMMLLENKASISGGGLPAPYQAKQLHLHWSDL-PYKGSEHSLDGEHFAMEMHIVHEKEKGTSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYDK---EQTVSMKDNVRPLQQLGQRTVIKSGAPGRPLPWALPALLGPMLACLLAGFLR |
| 1JD0 Chain:A ((3-262)) | ----------KWTYFGPDGENSWSKK----------------YPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSDMHIQG--LQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSD-LYPDASTASNKSEGLAVLAVLIEMGSF-NPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLP--ERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFS-------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1JD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -85048 for 2054 contacts (-41.4/contact) +
2D Compatibility (PS) -27029 + (NN) -8027 + (LL) 4120
1D Compatibility (HY) -19600 + (ID) 4400
Total energy: -139984.0 ( -68.15 by residue)
QMean score : 0.296
|
|
|