Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES
3E27 Chain:B ((1-188))
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRDITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYE-
General information:
TITO was launched using:
RESULT:
Template:
3E27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149045 for 1485 contacts (-100.4/contact) +
2D Compatibility (PS) -20851 + (NN) -15807 + (LL) -28
1D Compatibility (HY) -30000 + (ID) 9350
Total energy: -225081.0 ( -151.57 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_3E27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E27-query.scw
PDB file :
Tito_Scwrl_3E27.pdb
: