Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVEPETTPTPNPPPAEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
1EJ4 Chain:A ((5-190))
-------------------------------EHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTAT-------NRFVV
General information:
TITO was launched using:
RESULT:
Template:
1EJ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94017 for 1379 contacts (-68.2/contact) +
2D Compatibility (PS) -18805 + (NN) -8068 + (LL) 952
1D Compatibility (HY) -26400 + (ID) 8950
Total energy: -155288.0 ( -112.61 by residue)
QMean score : 0.682
(partial model without unconserved sides chains):
PDB file :
Tito_1EJ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EJ4-query.scw
PDB file :
Tito_Scwrl_1EJ4.pdb
: