Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNVIEFILLGLTHNPELQKFLFVMFLITYLITLAGNLFISVIIFISPALGSPMYSFPSYLFIIDIFCSSSIAPKMNFDLISEKNTISFNGCMTQLFTEHFFYYYYYYTLTEIILLSVMAYDHYVAIRKPLHYATIMSQPMCGFLMVVAGILGFVHGGIQTLFIAQLPFCGPNVINHFMCDLVPLLELACTDTHTLGPLIAANSGSLCFLIFSMLVASYVIILCFLRTHSSEGRRKALSSCASHIFIVILFFVPFSYLYLRPT-SF--------------PTDKAVTVFCTLFTPMLNPLIYTLKNKEVKNVIKKLWKQIMTTDDK |
2LNL Chain:A ((35-323)) | --------------ETLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALT-LPIWAASK-VNGWIFGTFLCKVVSLLKEV------NFYSGILLLACISVDRYLAIVHATRTLT-QKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYH----PNNSSPVCYEVLGND----TAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178892 for 1974 contacts (-90.6/contact) +
2D Compatibility (PS) -27342 + (NN) -3714 + (LL) 3004
1D Compatibility (HY) -20800 + (ID) 2100
Total energy: -229844.0 ( -116.44 by residue)
QMean score : 0.176
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