Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSCVKLWPSGAPAPLVSIEELENQELVGKGGFGTVFRAQHRKWGYDVAVKIVNSKAIS-----REVKAMASLDNEFVLRLEGVIEKVNWDQDPKPALVTKFMENGSLSGLL---QSQCPRPWPLLCRLLKEVVLGMFYLHDQNPVLLHRDLKPSNVLLDPELHVKLADFGLSTFQGGSQSGTGSGEPGGTLGYLAPELFVNVNRKASTASDVYSFGILMWAVLAGREVELP-TEPSLVYEAVCNRQNRPSLAELPQAGPETPGLEGLKELMQLCWSSEPKDRPSFQECLPKTDEVFQMVENNMNAAVSTVKDFLSQLRSSNRRFSIPESGQGGTEMDGFRRTIENQHSRNDVMVSEWLNKLNLEEPPSSVPKKCPSLTKRSRAQEEQVPQAWTAGTSSDSMAQPPQTPETSTFRNQMPSPTSTGTPSPGPRGNQGAERQGMNWSCRTPEPNPVTGRPLVNIYNCSGVQVGDNNYLTMQQTTALPTWGLAPSGKGRGLQHPPPVGSQEGPKDPEAWSRPQGWYNHSGK |
| 4CSV Chain:A ((12-268)) | -------------------EITLERKLGSGQFGEVYEGKWRNYNIEVAVKTLKEGTMSVEEFLQEAQIMKKLKHPNLVQLYGVCTK-----EPPIYIITEYMSHGSLLDYLRDC----VNAQALL-DMAAQVASGMAYLESQN--FIHRDLAARNCLVGENNVVKVADFG------------------FPIKWTAPEA-ISYNR-FSIKSDVWAFGILLWEIFTYGQVPYPGMSGSEVIEQVERGYRMPR----PQGCPEE-----IYELMLQCWNKSPEERPTFAETLHALETMFL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123901 for 1739 contacts (-71.2/contact) +
2D Compatibility (PS) -24280 + (NN) -12688 + (LL) 8620
1D Compatibility (HY) -20800 + (ID) 4200
Total energy: -177249.0 ( -101.93 by residue)
QMean score : 0.454
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