Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVGCPEPEPPRSLTCCGPGTAPGPGAGVPLLTEDMQALTLRTLAASDVTKHYELVRELGKGTYGKVDLVVYKGTGTKMALKFVNKSKTKL--KNFLREVSITNSLSSSPFIIKVFDVVFETEDCYVFAQEYAPAGDLFDIIPPQVGLPEDTVKRCVQQLGLALDFMHGRQLVHRDIKPENVLLFDRECRRVKLADFGMTR--RVGCR---VKRVSGTIPYTAPEVCQAGRADGLAVDTGVDVWAFGVLIFCVLTGNFPWEAASGADAFFEEFVRWQRGRLPGLPSQWRRFTEPALRMFQRLLALEPERRGPAKEVFRFLKHELTSELRRRPSHRARKPPGDRPPAAGPLRLEAPGPLKRTVLTESGSGSRPAPPAVGSVPLPVPVPVPVPVPVPVPEPGLAPQGPPGRTDGRADKSKGQVVLATAIEICV |
| 4HYI Chain:A ((9-253)) | ----------------------------------------------------WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---CPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA----EPVDVWSCGIVLTAMLAGELPWDQPSDS---CQEYSDWKEKKTYLNP--WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAK---------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HYI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -139538 for 1802 contacts (-77.4/contact) +
2D Compatibility (PS) -24804 + (NN) -15509 + (LL) 4992
1D Compatibility (HY) -20800 + (ID) 4000
Total energy: -199659.0 ( -110.80 by residue)
QMean score : 0.459
|
|
|