Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSCSTVYNTLMPCLGYVQS---GG---V------------VPRACCGGIKKLVSTARSTPDRRSICTCLKNVGSGAAGG---PY-----VSRAAGLPGKCKVPLPFNCNSN
1W2Q Chain:A ((22-115))
-------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-----N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQ-----
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37631 for 406 contacts (-92.7/contact) +
2D Compatibility (PS) -6641 + (NN) -1106 + (LL) 452
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -47126.0 ( -116.07 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: