Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AEAEAAAEVSCGDAVSALIPCGSFLVGAVAGAPSESCCRGAQGLRRMAGTPGARRALCRCLEQS-GPSFGVLPDRARQLPALCKLGISIPVSPHTDCDKIQ
2RKN Chain:A ((2-75))
-------IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHA--------DFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAP------------
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45849 for 498 contacts (-92.1/contact) +
2D Compatibility (PS) -7627 + (NN) -883 + (LL) 1320
1D Compatibility (HY) -800 + (ID) 1050
Total energy: -54889.0 ( -110.22 by residue)
QMean score : 0.281
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: