Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---CE--VTQLAVCASAILGGTK-PSGECCGNLRAQQGCFCQYVKDPN------------YGHY--VNSPHARETLQTCGIALP-------HC----
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNA----ARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22011 for 347 contacts (-63.4/contact) +
2D Compatibility (PS) -5999 + (NN) 1681 + (LL) 400
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -28329.0 ( -81.64 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: