Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-ATCS--PTQLTPCAPAIIGNAA-PSAACCGKLKAHPAS------------CLCKYKKD-PNLQRYVNSPNGKKVFAACKLRLP-------RC----
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSG----LNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13898 for 395 contacts (-35.2/contact) +
2D Compatibility (PS) -6408 + (NN) -1660 + (LL) 488
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -25878.0 ( -65.51 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: