Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------------------------------------------------QCDPEQLSACVSPIFYGTAPSESCCSNLRAQQKEGCLCQYAKDPTYASYVNNTN-ARKTIAACG-IPIPS---C-------------------------------
1QNT Chain:A ((6-176))
EMKRTTLDSPLGKLELSGCEQGLHEIKLLGKDAVEVPAPAAVLGGPEPLMQCTAWLNAYFHQPEAIEEFPVPALHHPVFQQESFTRQVLWKLLKVVKFGEVISYQQ---LAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCSSGAVGNYSGGLAVKEWLLAHEGHRL
General information:
TITO was launched using:
RESULT:
Template:
1QNT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19202 for 373 contacts (-51.5/contact) +
2D Compatibility (PS) -6815 + (NN) -567 + (LL) -164
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -31498.0 ( -84.45 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_1QNT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QNT-query.scw
PDB file :
Tito_Scwrl_1QNT.pdb
: