Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPPGGCVPQLN--RLLACRAYLVPG----A------ADP-----------SADCCSALSSISRDCACSTMG----------------------IINSIPSRCNIGRVNCSA
1PSY Chain:A ((16-116))
---QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV-------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39144 for 360 contacts (-108.7/contact) +
2D Compatibility (PS) -5734 + (NN) -2445 + (LL) 52
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -52321.0 ( -145.34 by residue)
QMean score : 0.288
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: