Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IDLCGMSQDELNECKPAVS----KENPT----------SPSQPCCTALQHADFACLCGYKNSPWL-----GSFGV-----DPELASALPKQCGLANAPTC
1SM7 Chain:A ((14-104))
---------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTC
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25794 for 422 contacts (-61.1/contact) +
2D Compatibility (PS) -6637 + (NN) 2248 + (LL) 412
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -33821.0 ( -80.14 by residue)
QMean score : 0.311
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: