Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EGAGECGRSSPDRMALRMAPCISAADEPD----SA-----PSSSCCSAVHTLGKSPSCLCAVMLSGTAK---MA---------G--------IKPEVAITI--PKRCNMADRPVGYKCGDYTLP
1BEA Chain:A ((16-109))
----------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34128 for 393 contacts (-86.8/contact) +
2D Compatibility (PS) -6287 + (NN) 304 + (LL) 264
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -43547.0 ( -110.81 by residue)
QMean score : 0.262
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: