Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DLRKGCYDLGI-TVLMGCPDSIDKK-LP------APPTP-----------SEGCCTLVRTIGMKCVCEIVNKKIEDTI------------DMQKLVNVAAACGRPLAPGSQCGSYRVPGA
1PSY Chain:A ((16-116))
---QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV----------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46101 for 495 contacts (-93.1/contact) +
2D Compatibility (PS) -7073 + (NN) -2101 + (LL) 232
1D Compatibility (HY) 0 + (ID) 800
Total energy: -55843.0 ( -112.81 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: