Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVQSALVPCLSYLKTT----GPT-----PPATCCNGVRTINNAAKTTADRRTACQCLKSAAGSVK---G---------L---------NPTTVAGLPGKCGVNIPYKISLSTNCATVK
1B1U Chain:A ((15-109))
-------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38226 for 416 contacts (-91.9/contact) +
2D Compatibility (PS) -6533 + (NN) -1436 + (LL) 1880
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -47865.0 ( -115.06 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: