Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceAPPSCQTVTTQLAPCLSYIQNRVKGGGNPSVPCCTGINNIYELAKTKEDRVAICNCLKNAFIHA----GNVN-----PTLVAELPKKCGISFNMPPIDKNYDCNTISMY
3OB4 Chain:A ((428-485))-----------------------------QERCCNELNEFE------NNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAP----------------


General information:
TITO was launched using:
RESULT:

Template: 3OB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23308 for 261 contacts (-89.3/contact) +
2D Compatibility (PS) -4906 + (NN) -1299 + (LL) 1984
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -29579.0 ( -113.33 by residue)
QMean score : 0.187

(partial model without unconserved sides chains):
PDB file : Tito_3OB4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OB4-query.scw
PDB file : Tito_Scwrl_3OB4.pdb: