Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AIECSDVLSRPVHCLSYFVTPR--ATLT-----PTSACCRESEEVLGMANSMGAKEDLCNCFVGLIRGF----R---------P-N--------PNKIEGLLSSCALQLFFPIDPVTALPDCTQIQ
1B1U Chain:A ((15-110))
--------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG--------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22084 for 431 contacts (-51.2/contact) +
2D Compatibility (PS) -6415 + (NN) 476 + (LL) 1944
1D Compatibility (HY) -800 + (ID) 600
Total energy: -27479.0 ( -63.76 by residue)
QMean score : 0.203
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: