Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DPLPPCTVIVNQLNPCVPFLTRNVATPSQTCCGGVRYLANYSSSKGDRISICQCIEGSQSMFPLIDFSLISNLPASCSVPITLPKITPTFDCSTV
3OB4 Chain:A ((471-485))
-------------------------------------------------------------------RELRNLPQQCGLRAP-------------
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3573 for 54 contacts (-66.2/contact) +
2D Compatibility (PS) -1542 + (NN) -1100 + (LL) 3612
1D Compatibility (HY) -800 + (ID) 200
Total energy: -3603.0 ( -66.72 by residue)
QMean score : 0.044
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: