Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCGQVSSAIAPCLSYARGTGSGPSASCCSGVRNLKSAASTAADRRAACNCL--KNA-ARGLSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
1L6H Chain:A ((6-66))
--------GQLTVCTGAIAGGA-RPTAACCSSLRA-----------QQGCFCQFAKDPRYGR--YVNSPNARKAVSSCGIALP-------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21149 for 381 contacts (-55.5/contact) +
2D Compatibility (PS) -6139 + (NN) -1910 + (LL) 2084
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -30814.0 ( -80.88 by residue)
QMean score : 0.269
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: