Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------ACNPSELMACASSIL-----QSKPPTAQCCAKLKEQQPCFCQYKKDPSLKGYINPAN-----------FKKVAACRVQVPKC-------------------------------
1JLV Chain:A ((85-207))
KDPQKRAVVNQRLYFDMGTLYQRFADYYYPQIFAKQPANAENEKKMKDAVDFLNTFLDG---HKYVAGDSLTIADLTVLATVSTYDVAGFELAKYPHVAAWYERTRKEAPGAAINEAGIEEFRKYF
General information:
TITO was launched using:
RESULT:
Template:
1JLV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11606 for 343 contacts (-33.8/contact) +
2D Compatibility (PS) -6756 + (NN) -7530 + (LL) 8
1D Compatibility (HY) -4400 + (ID) 350
Total energy: -30634.0 ( -89.31 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_1JLV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JLV-query.scw
PDB file :
Tito_Scwrl_1JLV.pdb
: