Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAACD--PKPLVVCDPAFMDGAK-PAAACCSTLRAQEACLCVYAKDPK------------FAKY--INNPNTAKTFTSCGIAIP-------KC----
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNA----ARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17771 for 365 contacts (-48.7/contact) +
2D Compatibility (PS) -6469 + (NN) -1726 + (LL) 516
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -28400.0 ( -77.81 by residue)
QMean score : 0.308
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: