Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DFSALAPCDVTQLTPCASAFAGKASPTAACCAKL----MSHGPVCLCRYKDDASLKRLVDARHKRRVFTA-CKVPVPS---C---
1HYP Chain:? ((6-80))
-----PSCP--DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRALGI---LNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18334 for 394 contacts (-46.5/contact) +
2D Compatibility (PS) -6666 + (NN) -4113 + (LL) 932
1D Compatibility (HY) -6000 + (ID) 750
Total energy: -34931.0 ( -88.66 by residue)
QMean score : 0.352
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: