Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QVTLCGMTKEGFASCKPSVQT---GVNPLP----PSYSCCSALEKADLSCLCFFKKNYPKM------------LTDN-N--ID----PNLAMQLPAKCNMAGSFSCK
1B1U Chain:A ((12-108))
------IPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI----
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22242 for 464 contacts (-47.9/contact) +
2D Compatibility (PS) -7220 + (NN) -983 + (LL) 648
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -32697.0 ( -70.47 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: