Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ENPCRLTNEGIEACRPSVTGQN-----PAAP-----------SDACCAALSKA--DLQCLCFYKNNYPWL----LSSYKI--D-PNLAMQLPVKCKLVGESFHC
1W2Q Chain:A ((23-112))
--------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22268 for 388 contacts (-57.4/contact) +
2D Compatibility (PS) -6393 + (NN) 379 + (LL) 324
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -31308.0 ( -80.69 by residue)
QMean score : 0.245
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: