Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCLDNLSNMQVCAPLVL-----PGAVNPAP----NSNCCIALQATNKDCICNALR--------------------------------AATTF--TTSCNLPSLDC
1BEA Chain:A ((14-109))
------HNPLPSCRWYVTSRTCGIGP--RLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI--
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38335 for 310 contacts (-123.7/contact) +
2D Compatibility (PS) -5712 + (NN) -5732 + (LL) 408
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -53771.0 ( -173.45 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: