Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCLDNLSNMQVCAPLVLP---GAVNPAP----NSNCCIALQATNKDCICNALR--------------------------------AATTF--TTTCNLPSLDC
1BEA Chain:A ((15-109))
-------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI--
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40800 for 322 contacts (-126.7/contact) +
2D Compatibility (PS) -5717 + (NN) -4271 + (LL) 472
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -54716.0 ( -169.93 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: