Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIRSAAASLSPCLSAAG----NVRA-A----VPPTCCSKVGSLIKTAPKCLCAVLLSP---LAKQ---------A--------GIKPGIAITI--PKRCNIGNRPAGKKCGSK
1BEA Chain:A ((16-109))
--------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI---------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35485 for 383 contacts (-92.7/contact) +
2D Compatibility (PS) -5876 + (NN) 3076 + (LL) 844
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -42041.0 ( -109.77 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: