Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IGAGGSRSKRDRESCEESR------IQTCLDVVN---SGLKIS----TECCKFLKE-QQPCLCD---VTKTSKIKTNVLSSRL-------------KSCGIHNLKCGNNNNAMRT---SNPPNQ
1HSS Chain:A ((5-124))
-------------MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5200 for 385 contacts (-13.5/contact) +
2D Compatibility (PS) -8151 + (NN) -5260 + (LL) 168
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -22743.0 ( -59.07 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: