Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDPITPGPTIADCSPRLVALMPCAPFVQGT---AQMP---AQSCCDNLNQLYTLQPGCLCLLLNDT--------TLSD--F---P--INRTRALQLPVLCKLQANASACSEID
1HSS Chain:A ((15-103))
-----------------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPI---------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49086 for 372 contacts (-132.0/contact) +
2D Compatibility (PS) -5755 + (NN) -112 + (LL) 1080
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -59073.0 ( -158.80 by residue)
QMean score : 0.223
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: