Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TTNEPTVCNIALTKLNLCRPAVT----GQ-YPPP-------PTKECCGLMKQANLTCLCKFKEA-LPA-------F-E----IDPARAFALPKKCNLRTPPQCKV
2LVF Chain:A ((16-107))
------------QMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPSRCNLS-PMRCPM
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5504 for 376 contacts (-14.6/contact) +
2D Compatibility (PS) -7116 + (NN) -6106 + (LL) 784
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -21542.0 ( -57.29 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: