Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DVNQDKTECANQL--VGLASCLPYVGGQ------SKTP-----------TIDCCSGLKQVLDKSRKCLCVLIKDRDDPSL----G----LKINATLAATLPSTCHAPVNMTECI
1W2Q Chain:A ((14-112))
------SSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQDRQMVQQF-KRELMSLPQQCNFR-------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46637 for 453 contacts (-103.0/contact) +
2D Compatibility (PS) -7257 + (NN) -604 + (LL) 724
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -58424.0 ( -128.97 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: