Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRSSPDREAW--KLAPCAMAAQDSNA---------------------QVSDSCCQQVKKMGQNPRCLCAVMLSNTAK----------SSGVKPEIAVTIPKRCNIPDRPVGYKCGDYTLP
1PSY Chain:A ((16-116))
------QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV---------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11606 for 482 contacts (-24.1/contact) +
2D Compatibility (PS) -7081 + (NN) -3603 + (LL) -84
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -24374.0 ( -50.57 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: