Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SEVPTSRGGMSPTQCKEKQRL-LVNACSAVMFGH--S----------P-----------SSDCCKHVRLTQVQCVCPAITSKLAGLV------------GVEHTIKQIESCGRTVPRNFKCGI
1PSY Chain:A ((13-116))
---------SSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV----------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22718 for 501 contacts (-45.3/contact) +
2D Compatibility (PS) -6658 + (NN) -1227 + (LL) 316
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -32237.0 ( -64.35 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: