Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRTPIRSAAASLSPCLGAAGNAK----A--KVPPACCSKVAALLKTTPKCLCAILLSPLA---KQA--------GIKPGIAIGIPKRCNIRNRQAGKKCGN
1HSS Chain:A ((16-106))
--------------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVD------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41262 for 410 contacts (-100.6/contact) +
2D Compatibility (PS) -6370 + (NN) 224 + (LL) 732
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -51826.0 ( -126.40 by residue)
QMean score : 0.278
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: