Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKSSPDNEAIKLAPCAEAAQDQN------A---AVSASCCDQVRKIGRSPSCLCAVMLSNTAK---A------------SG----I-K-PEIAITIPKRCNIANRPVGYKCGPYTLP
1B1U Chain:A ((16-110))
--------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG----------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31194 for 418 contacts (-74.6/contact) +
2D Compatibility (PS) -6822 + (NN) -3279 + (LL) -40
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -45185.0 ( -108.10 by residue)
QMean score : 0.366
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: