Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DWAEDKKECSNQLVALSTCIPFVGGNTKVPDSTCCTNLRKKINQTKKCLCLLVADRND------PDLG---FKVNATLALILPSICHAPSNASECPAEANKSSQ
2DS2 Chain:B ((8-68))
-------------------------------RQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI-GACP--------
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17323 for 290 contacts (-59.7/contact) +
2D Compatibility (PS) -5595 + (NN) -6036 + (LL) 2204
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -30300.0 ( -104.48 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: