Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCPQTITFSPCLTNVGNTGTPPAYDSQCCKLVR---DPKWTDQCLCAVVSSHFPGV-DETKALNLAHD-CGRRVPKGIYCDGRPVPP
1HYP Chain:? ((6-80))
PSCPD---LSICL-NILGGSLGTV--DDCCALIGGLGDIE-AIVCLCIQLRAL--GILNLNRNLQLILNSCGRSYPSNATCPRT----
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33755 for 445 contacts (-75.9/contact) +
2D Compatibility (PS) -7642 + (NN) -8432 + (LL) 296
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: -57033.0 ( -128.16 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: