Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGCDILKLTPCVAASRNAKVM-----------------PSRQCCSNIAGMGKGLPGAKCLCSLLSHPLA------RSQGV---APRIALGIPQKCRIAVPRGFVCQGIRVPGS
1W2Q Chain:A ((23-112))
-----VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMEN---TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR---------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37180 for 401 contacts (-92.7/contact) +
2D Compatibility (PS) -6338 + (NN) 1472 + (LL) 484
1D Compatibility (HY) -5600 + (ID) 650
Total energy: -47812.0 ( -119.23 by residue)
QMean score : 0.176
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: