Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPSPNPSCGAQLSQLGPCARYSVPPMPGQALPAPGPECCSALGSV--SRDCACGAID---------------------IINSLPAKCGLP-RISCQ
3OB4 Chain:A ((429-489))
-----------------------------------ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCD
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17277 for 195 contacts (-88.6/contact) +
2D Compatibility (PS) -3804 + (NN) -201 + (LL) 148
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -25734.0 ( -131.97 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: