Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRVPVDRTALKLAPCAAATQNPRA---------------AVPPSCCAQVRGIGRNPKCLCAVMLSNTA----RQ-AG-----VKPAVAMTIPKRCAIANRPIGYKCGPYTLP
1SM7 Chain:A ((14-100))
--------------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ-------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46340 for 395 contacts (-117.3/contact) +
2D Compatibility (PS) -6118 + (NN) -365 + (LL) 700
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -56273.0 ( -142.46 by residue)
QMean score : 0.110
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: