Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
RECVPQLNRLLACRAYLAAPGAAAAAP---SAECCGALAGISRECACSTMA-----------------------IINSIPSRCGVSQVNCTASSTST
1HSS Chain:A ((15-104))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV---------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44972 for 341 contacts (-131.9/contact) +
2D Compatibility (PS) -5752 + (NN) -3113 + (LL) 800
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -58737.0 ( -172.25 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: