Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPADQMA--LKLAPCLTAAKDPEAS-----------------PSKSCCAAVVDIWGHSTECLCAVLLSNTL---KRF-G--V---KVEVAITIPKRCNIANRPIGYKCGDYTLPSLQD
1W2Q Chain:A ((15-112))
-------SCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR------------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44180 for 448 contacts (-98.6/contact) +
2D Compatibility (PS) -7075 + (NN) -2022 + (LL) 232
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -56845.0 ( -126.89 by residue)
QMean score : 0.240
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: