Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQPANCNGQLNQLIPCLSYVQ-----GQATQP----AQSCCSGLKSIAGSNPACLCSLISANA--------G----SIP----G----INSTLALEL--PAKCNLQGLNP-SLCSVFISGFLPLR
1BEA Chain:A ((16-117))
------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPW---------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47398 for 445 contacts (-106.5/contact) +
2D Compatibility (PS) -7227 + (NN) -2725 + (LL) 828
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -62322.0 ( -140.05 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: